SIFR Project: The Semantic Indexing of French Biomedical Data Resources
نویسندگان
چکیده
The Semantic Indexing of French Biomedical Data Resources project proposes to investigate the scientific and technical challenges in building ontology-based services to leverage biomedical ontologies and terminologies in indexing, mining and retrieval of French biomedical data.
منابع مشابه
ICD10 Coding of Death Certificates with the NCBO and SIFR Annotator(s) at CLEF eHealth 2017 Task 1
The SIFR BioPortal is an open platform to host French biomedical ontologies and terminologies based on the technology developed by the US National Center for Biomedical Ontology (NCBO). The portal facilitates the use and fostering of terminologies and ontologies by offering a set of services including semantic annotation. The SIFR Annotator (http://bioportal.lirmm.fr/annotator) is a publicly ac...
متن کاملEnrichment of French Biomedical Ontologies with UMLS Concepts and Semantic Types for Biomedical Named Entity Recognition Though Ontological Semantic Annotation
Medical terminologies and ontologies are a crucial resource for semantic annotation of biomedical text. In French, there are considerably less resources and tools to use them than in English. Some terminologies from the Unified Medical Language System have been translated but often the identifiers used in the UMLS Metathesaurus, that make its huge integrated value, have been lost during the pro...
متن کاملMuEVo, a Breast Cancer Consumer Health Vocabulary Built Out of Web Forums
Semantically analyze patient-generated text from a biomedical perspective is challenging because of the vocabulary gap between patients and health professionals. The medical expertise and vocabulary is well formalized in standards terminologies and ontologies, which enable semantic analysis of expertgenerated text; however resources which formalize the vocabulary of health consumers (patients a...
متن کاملEnhanced functionalities for annotating and indexing clinical text with the NCBO Annotator1
Summary: Second use of clinical data commonly involves annotating biomedical text with terminologies and ontologies. The National Center for Biomedical Ontology Annotator is a frequently used annotation service, originally designed for biomedical data, but not very suitable for clinical text annotation. In order to add new functionalities to the NCBO Annotator without hosting or modifying the o...
متن کاملCombining terminologies and ontologies to integrate biomedical information
The post genomics era is characterized by huge amounts of biomedical information, distributed in multiple databanks (e.g. SWISS-PROT, OMIM, LocusLink, GenBank, as well as many others). Despite recent efforts to provide standard ontologies such as Gene Ontology, semantic heterogeneity is a major obstacle to information integration. Each databank has its own identifiers for genes and gene product...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره شماره
صفحات -
تاریخ انتشار 2014